PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678307242
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family TCP
Protein Properties Length: 279aa    MW: 32105 Da    PI: 10.3297
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678307242genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP113.62.7e-35972246131
        TCP   6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg.....kaaksaa.kskk 99 
                d+hski T++g+RdRR+Rls+++a+rfFdLqd LGfdk+s t++WLl+ +  aikel++   ++++e e++s s + +    +      ++++ + +s +
  678307242  97 DKHSKINTARGPRDRRIRLSLDVARRFFDLQDLLGFDKASRTLDWLLKSSRIAIKELASKLKNPHKEEEKVSVSDKPA----SvehgvGKMSKRKkPSGS 192
                99**********************************************************666663332222222222....123456444444414444 PP

        TCP 100 sqksaasalnlakesrakarararertrekmr 131
                + +s   ++ +  esr  ar+rarert++k+r
  678307242 193 AASSRRGVRVVGMESRRMARERARERTSQKKR 224
                4444444566666**************99976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136930.31595153IPR017887Transcription factor TCP subgroup
PfamPF036344.3E-3297224IPR005333Transcription factor, TCP
PROSITE profilePS513708.81205222IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MHPSSNYRSS FVIRTELEKI LYPQNEFEFD FDFDFDYPFF RLPTDSSHIR NHMEFGNLQH  60
QFLGIYTNHT PTGDSLEEPT QNRNGEGRKQ QSRRFADKHS KINTARGPRD RRIRLSLDVA  120
RRFFDLQDLL GFDKASRTLD WLLKSSRIAI KELASKLKNP HKEEEKVSVS DKPASVEHGV  180
GKMSKRKKPS GSAASSRRGV RVVGMESRRM ARERARERTS QKKRRLFTQT YNLPSSNAHV  240
EAASSSSYYD IGFAFEDPPG LGPLLSDCLH QDLVYSSSK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.25e-25TCP family protein